genetic circuit

Learning Genetic Regulatory Network Connectivity from Time Series Data

Recent experimental advances facilitate the collection of time series data that indicate which genes in a cell are expressed. This information can be used to understand the genetic regulatory network that generates the data. Typically, Bayesian …

Model Abstraction and Temporal Behavior Analysis of Genetic Regulatory Networks

With advances in technologies such as high throughput data collection and genome sequencing methods, the Human Genome Project which, among other things, determined the human DNA sequence and identified all the genes in human DNA was completed at …

The Design of a Genetic Muller C-Element

Synthetic biology uses engineering principles to design circuits out of genetic materials that are inserted into bacteria to perform various tasks. While synthetic combinational Boolean logic gates have been constructed, there are many open issues in …

Learning genetic regulatory network connectivity from time series data

Abstract. Recent experimental advances facilitate the collection of time series data that indicate which genes in a cell are expressed. This paper proposes an efficient method to generate the genetic regulatory network inferred from time series data. …

Automated Abstraction Methodology for Genetic Regulatory Networks

Asynchronous abstraction methodology for genetic regulatory networks

Abstract. In order to efficiently analyze a large scale system in an automated and objective manner, abstraction is essential. This paper presents an automated abstraction methodology that systematically reduces the small scale complexity found in …